OBO Foundry dashboard analysis¶

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/tmp/ipykernel_325/4293058459.py:21: FutureWarning:

The `inplace` parameter in pandas.Categorical.reorder_categories is deprecated and will be removed in a future version. Reordering categories will always return a new Categorical object.

Ontologies by number of axioms

Ontologies by number of classes

Ontologies by how many ontologies use it

Different serialisations used

RDF/XML Syntax    1
Name: syntax, dtype: int64

Breakdown of used Axiom Types

count mean std min 25% 50% 75% max
AnnotationAssertion 1 9187.0 NaN 9187.0 9187.0 9187.0 9187.0 9187.0
IrrefexiveObjectProperty 1 1.0 NaN 1.0 1.0 1.0 1.0 1.0
SymmetricObjectProperty 1 1.0 NaN 1.0 1.0 1.0 1.0 1.0
SubObjectPropertyOf 1 99.0 NaN 99.0 99.0 99.0 99.0 99.0
SubClassOf 1 2365.0 NaN 2365.0 2365.0 2365.0 2365.0 2365.0
SubAnnotationPropertyOf 1 20.0 NaN 20.0 20.0 20.0 20.0 20.0
SameIndividual 1 7.0 NaN 7.0 7.0 7.0 7.0 7.0
ObjectPropertyRange 1 71.0 NaN 71.0 71.0 71.0 71.0 71.0
ObjectPropertyDomain 1 72.0 NaN 72.0 72.0 72.0 72.0 72.0
ObjectPropertyAssertion 1 333.0 NaN 333.0 333.0 333.0 333.0 333.0
NegativeObjectPropertyAssertion 1 1.0 NaN 1.0 1.0 1.0 1.0 1.0
InverseObjectProperties 1 17.0 NaN 17.0 17.0 17.0 17.0 17.0
AnnotationPropertyDomain 1 1.0 NaN 1.0 1.0 1.0 1.0 1.0
EquivalentClasses 1 137.0 NaN 137.0 137.0 137.0 137.0 137.0
DisjointObjectProperties 1 1.0 NaN 1.0 1.0 1.0 1.0 1.0
DisjointClasses 1 47.0 NaN 47.0 47.0 47.0 47.0 47.0
DifferentIndividuals 1 6.0 NaN 6.0 6.0 6.0 6.0 6.0
Declaration 1 1856.0 NaN 1856.0 1856.0 1856.0 1856.0 1856.0
DataPropertyDomain 1 1.0 NaN 1.0 1.0 1.0 1.0 1.0
ClassAssertion 1 237.0 NaN 237.0 237.0 237.0 237.0 237.0
AsymmetricObjectProperty 1 1.0 NaN 1.0 1.0 1.0 1.0 1.0
AnnotationPropertyRangeOf 1 1.0 NaN 1.0 1.0 1.0 1.0 1.0
TransitiveObjectProperty 1 2.0 NaN 2.0 2.0 2.0 2.0 2.0

Breakdown of used OWL Class Expression constructs

count mean std min 25% 50% 75% max
Class 1 7085.0 NaN 7085.0 7085.0 7085.0 7085.0 7085.0
DataHasValue 1 4.0 NaN 4.0 4.0 4.0 4.0 4.0
ObjectAllValuesFrom 1 16.0 NaN 16.0 16.0 16.0 16.0 16.0
ObjectComplementOf 1 18.0 NaN 18.0 18.0 18.0 18.0 18.0
ObjectExactCardinality 1 2.0 NaN 2.0 2.0 2.0 2.0 2.0
ObjectHasValue 1 78.0 NaN 78.0 78.0 78.0 78.0 78.0
ObjectIntersectionOf 1 182.0 NaN 182.0 182.0 182.0 182.0 182.0
ObjectMinCardinality 1 3.0 NaN 3.0 3.0 3.0 3.0 3.0
ObjectOneOf 1 3.0 NaN 3.0 3.0 3.0 3.0 3.0
ObjectSomeValuesFrom 1 1082.0 NaN 1082.0 1082.0 1082.0 1082.0 1082.0
ObjectUnionOf 1 61.0 NaN 61.0 61.0 61.0 61.0 61.0

OBO Score (Experimental)

ontology score score_dash score_impact
0 oeo 0.219 0.438 0.0

OBO Score Summary

count mean std min 25% 50% 75% max
score 1.0 0.219 NaN 0.219 0.219 0.219 0.219 0.219
score_dash 1.0 0.438 NaN 0.438 0.438 0.438 0.438 0.438
score_impact 1.0 0.000 NaN 0.000 0.000 0.000 0.000 0.000

OBO dependency graph